Frequently Asked Questions

Everything you need to know about BioDockify.

What is BioDockify?

AI-powered drug discovery platform providing cloud-native molecular docking, QSAR, ADMET prediction, MD simulation, and autonomous AI research agents.

Is BioDockify free?

Yes! The Starter plan is completely free with 5 docking jobs/month. No credit card required.

3-Engine
What docking engines do you support?

AutoDock Vina, GNINA (CNN scoring), and SMINA with 3-engine consensus scoring and MM-GBSA free energy.

Cloud
Do I need to install anything?

No! BioDockify is entirely cloud-based. Access everything from your browser. No installation required.

What file formats are supported?

Proteins: PDB, PDBQT, ENT, MOL2, CIF. Ligands: SMI, SDF, MOL, PDB, MOL2. Auto-conversion via OpenBabel.

Is my research data secure?

Yes. Your structures and results are your IP. We use industry-standard encryption and do not access your data.

How does MD simulation work?

MD Lite uses OpenMM with GPU acceleration. Choose 20ns-100ns trajectories with auto-resume from checkpoints.

Do you have an API?

Yes! Professional and Enterprise plans include REST API access for integration into your workflows.